COG4138


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4138, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description ABC-type cobalamin transport system, ATPase component BtuD
Function(s) descr. Coenzyme transport and metabolism (H)

Occurence in the database

COG4138 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1804 FBDBKF_13385 55301 56074 -1 btuD ABC-type cobalamin transport system, ATPase component BtuD Morganella morganii S1
1 group_1804 EHELCC_08710 219117 219890 1 btuD ABC-type cobalamin transport system, ATPase component BtuD Morganella morganii S2
2 group_1804 NLDBIP_09035 219117 219890 1 btuD ABC-type cobalamin transport system, ATPase component BtuD Morganella morganii S4
3 group_1804 LHKJJB_05230 37269 38042 -1 btuD ABC-type cobalamin transport system, ATPase component BtuD Morganella morganii S3
4 group_1804 HKOGLL_05685 203708 204481 1 btuD ABC-type cobalamin transport system, ATPase component BtuD Morganella morganii S5
5 group_1804 F4V73_RS03375 719737 720504 1 ATP-binding cassette domain-containing protein Morganella psychrotolerans
6 group_1804 PMI_RS05065 1106770 1107519 1 ATP-binding cassette domain-containing protein Proteus mirabilis HI4320