COG4118


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4118, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor
Function(s) descr. Defense mechanisms (V)

Occurence in the database

COG4118 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2499 FBDBKF_01820 52245 52697 1 Antitoxin Morganella morganii S1
1 group_2499 EHELCC_02290 440065 440517 1 Antitoxin Morganella morganii S2
2 group_2499 NLDBIP_01170 239619 240071 -1 Antitoxin Morganella morganii S4
3 group_2499 LHKJJB_00865 152614 153066 1 Antitoxin Morganella morganii S3
4 group_2499 HKOGLL_00905 158125 158577 1 Antitoxin Morganella morganii S5
5 group_2499 F4V73_RS04145 876498 876914 1 type II toxin-antitoxin system Phd/YefM family antitoxin Morganella psychrotolerans