COG3700


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3700, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Acid phosphatase, class B
Function(s) descr. Inorganic ion transport and metabolism (P)
General function prediction only (R)

Occurence in the database

COG3700 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1243 FBDBKF_07230 122880 123593 1 aphA acid phosphatase AphA Morganella morganii S1
1 group_1243 EHELCC_03740 62593 63306 -1 aphA acid phosphatase AphA Morganella morganii S2
2 group_1243 NLDBIP_03740 62389 63102 -1 aphA acid phosphatase AphA Morganella morganii S4
3 group_1243 LHKJJB_09570 62503 63216 -1 aphA acid phosphatase AphA Morganella morganii S3
4 group_1243 HKOGLL_09405 127836 128549 1 aphA acid phosphatase AphA Morganella morganii S5
5 group_1243 F4V73_RS01415 310999 311712 1 aphA acid phosphatase AphA Morganella psychrotolerans
6 group_1243 PMI_RS03585 803332 804045 1 aphA acid phosphatase AphA Proteus mirabilis HI4320