COG3657


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3657, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 2 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Putative component of the toxin-antitoxin plasmid stabilization module
Function(s) descr. Defense mechanisms (V)

Occurence in the database

COG3657 is associated with 2 different proteins (see tab "Protein list" and "Profile")
The 2 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3899 PMI_RS10300 2258731 2259072 -1 type II toxin-antitoxin system RelE/ParE family toxin Proteus mirabilis HI4320
1 group_3899 PMI_RS18700 31545 31841 -1 type II toxin-antitoxin system RelE/ParE family toxin Proteus mirabilis HI4320