COG3411


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3411, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description 2Fe-2S ferredoxin
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG3411 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2750 FBDBKF_07640 40959 41678 1 2Fe-2S ferredoxin Morganella morganii S1
1 group_2750 EHELCC_13470 15153 15872 1 2Fe-2S ferredoxin Morganella morganii S2
2 group_2750 NLDBIP_13915 36028 36747 1 2Fe-2S ferredoxin Morganella morganii S4
3 group_2750 LHKJJB_08935 123002 123721 -1 2Fe-2S ferredoxin Morganella morganii S3
4 group_2750 HKOGLL_08485 123002 123721 -1 2Fe-2S ferredoxin Morganella morganii S5
5 group_2750 F4V73_RS13480 329068 329787 -1 (2Fe-2S) ferredoxin domain-containing protein Morganella psychrotolerans