COG3378


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3378, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 5 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description DNA primase, phage- or plasmid-associated
Function(s) descr. Mobilome: prophages, transposons (X)

Occurence in the database

COG3378 is associated with 5 different proteins (see tab "Protein list" and "Profile")
The 5 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3294 FBDBKF_09515 144 1598 -1 DUF5906 domain-containing protein Morganella morganii S1
1 group_3294 EHELCC_04315 192109 193563 -1 DUF5906 domain-containing protein Morganella morganii S2
2 group_3294 NLDBIP_04315 191905 193359 -1 DUF5906 domain-containing protein Morganella morganii S4
3 group_3294 LHKJJB_14315 142019 143473 1 DUF5906 domain-containing protein Morganella morganii S3
4 group_3294 HKOGLL_12220 925 2379 -1 DUF5906 domain-containing protein Morganella morganii S5