COG3265


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3265, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Gluconate kinase
Function(s) descr. Carbohydrate transport and metabolism (G)

Occurence in the database

COG3265 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1447 FBDBKF_09200 70351 70893 -1 gntK gluconokinase Morganella morganii S1
1 group_1447 EHELCC_10210 75211 75753 1 gntK gluconokinase Morganella morganii S2
2 group_1447 NLDBIP_10555 53482 54024 1 gntK gluconokinase Morganella morganii S4
3 group_1447 LHKJJB_10800 137504 138046 -1 gntK gluconokinase Morganella morganii S3
4 group_1447 HKOGLL_13860 70805 71347 -1 gntK gluconokinase Morganella morganii S5
5 group_1447 F4V73_RS10770 285403 285945 1 gntK gluconokinase Morganella psychrotolerans
6 group_1447 PMI_RS13170 2924270 2924824 -1 gntK gluconokinase Proteus mirabilis HI4320