COG3189


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3189, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Uncharacterized conserved protein YeaO, DUF488 family
Function(s) descr. Function unknown (S)

Occurence in the database

COG3189 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_588 FBDBKF_01715 32418 32768 1 yeaO DUF488 domain-containing protein Morganella morganii S1
1 group_588 EHELCC_02185 420238 420588 1 yeaO DUF488 domain-containing protein Morganella morganii S2
2 group_588 NLDBIP_01275 259548 259898 -1 yeaO DUF488 domain-containing protein Morganella morganii S4
3 group_588 LHKJJB_00760 132787 133137 1 yeaO DUF488 domain-containing protein Morganella morganii S3
4 group_588 HKOGLL_00800 138298 138648 1 yeaO DUF488 domain-containing protein Morganella morganii S5
5 group_588 F4V73_RS04045 856324 856674 1 DUF488 family protein Morganella psychrotolerans
6 group_588 PMI_RS14490 3213312 3213668 -1 DUF488 family protein Proteus mirabilis HI4320