COG3075


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3075, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Anaerobic glycerol-3-phosphate dehydrogenase
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG3075 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_776 FBDBKF_03590 122172 123458 -1 glpB glycerol-3-phosphate dehydrogenase subunit GlpB Morganella morganii S1
1 group_776 EHELCC_06945 123645 124931 1 glpB glycerol-3-phosphate dehydrogenase subunit GlpB Morganella morganii S2
2 group_776 NLDBIP_07270 123518 124804 1 glpB glycerol-3-phosphate dehydrogenase subunit GlpB Morganella morganii S4
3 group_776 LHKJJB_06805 87264 88550 1 glpB glycerol-3-phosphate dehydrogenase subunit GlpB Morganella morganii S3
4 group_776 HKOGLL_04125 144837 146123 -1 glpB glycerol-3-phosphate dehydrogenase subunit GlpB Morganella morganii S5
5 group_776 F4V73_RS11280 397472 398773 1 glpB glycerol-3-phosphate dehydrogenase subunit GlpB Morganella psychrotolerans
6 group_776 PMI_RS17875 3927103 3928410 1 glpB glycerol-3-phosphate dehydrogenase subunit GlpB Proteus mirabilis HI4320