COG3072


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3072, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Adenylate cyclase, class I
Function(s) descr. Signal transduction mechanisms (T)

Occurence in the database

COG3072 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1344 FBDBKF_08330 40975 43575 1 cyaA class I adenylate cyclase Morganella morganii S1
1 group_1344 EHELCC_13195 120150 122750 -1 cyaA class I adenylate cyclase Morganella morganii S2
2 group_1344 NLDBIP_13535 120150 122750 -1 cyaA class I adenylate cyclase Morganella morganii S4
3 group_1344 LHKJJB_13020 39693 42293 1 cyaA class I adenylate cyclase Morganella morganii S3
4 group_1344 HKOGLL_12010 120150 122750 -1 cyaA class I adenylate cyclase Morganella morganii S5
5 group_1344 F4V73_RS09530 5638 8229 1 class I adenylate cyclase Morganella psychrotolerans
6 group_1344 PMI_RS16585 3655180 3657777 1 class I adenylate cyclase Proteus mirabilis HI4320