COG3056


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3056, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 13 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Uncharacterized lipoprotein YajG
Function(s) descr. Function unknown (S)

Occurence in the database

COG3056 is associated with 13 different proteins (see tab "Protein list" and "Profile")
The 13 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_813 FBDBKF_04055 206330 206992 -1 Conjugal transfer protein Morganella morganii S1
1 group_2108 FBDBKF_15855 21722 22303 -1 yajG Uncharacterized lipoprotein YajG Morganella morganii S1
2 group_813 EHELCC_06480 40111 40773 1 Conjugal transfer protein Morganella morganii S2
3 group_2108 EHELCC_18455 9161 9742 -1 yajG Uncharacterized lipoprotein YajG Morganella morganii S2
4 group_813 NLDBIP_06805 39984 40646 1 Conjugal transfer protein Morganella morganii S4
5 group_2108 NLDBIP_17290 9161 9742 -1 yajG Uncharacterized lipoprotein YajG Morganella morganii S4
6 group_813 LHKJJB_06340 3730 4392 1 Conjugal transfer protein Morganella morganii S3
7 group_2108 LHKJJB_17370 46446 47027 1 yajG Uncharacterized lipoprotein YajG Morganella morganii S3
8 group_813 HKOGLL_04590 228995 229657 -1 Conjugal transfer protein Morganella morganii S5
9 group_2108 HKOGLL_17025 9161 9742 -1 yajG Uncharacterized lipoprotein YajG Morganella morganii S5
10 group_2108 F4V73_RS16455 109330 109911 1 YajG family lipoprotein Morganella psychrotolerans
11 group_2108 PMI_RS00540 139896 140474 -1 lipoprotein Proteus mirabilis HI4320
12 group_813 PMI_RS12810 2829254 2829916 -1 PilL N-terminal domain-containing protein Proteus mirabilis HI4320