COG3049


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3049, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 11 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Penicillin V acylase or related amidase, Ntn superfamily
Function(s) descr. Cell wall/membrane/envelope biogenesis (M)
General function prediction only (R)

Occurence in the database

COG3049 is associated with 11 different proteins (see tab "Protein list" and "Profile")
The 11 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_179 FBDBKF_04595 117453 118532 -1 Major facilitator superfamily (MFS) profile domain-containing protein Morganella morganii S1
1 group_179 EHELCC_05885 176910 177989 -1 Major facilitator superfamily (MFS) profile domain-containing protein Morganella morganii S2
2 group_179 NLDBIP_06205 217975 219054 -1 Major facilitator superfamily (MFS) profile domain-containing protein Morganella morganii S4
3 group_179 LHKJJB_03085 195499 196578 -1 Major facilitator superfamily (MFS) profile domain-containing protein Morganella morganii S3
4 group_179 HKOGLL_06560 117363 118442 -1 Major facilitator superfamily (MFS) profile domain-containing protein Morganella morganii S5
5 group_179 F4V73_RS09045 1890867 1891946 -1 linear amide C-N hydrolase Morganella psychrotolerans
6 group_179 F4V73_RS11330 407954 409072 -1 linear amide C-N hydrolase Morganella psychrotolerans
7 group_179 F4V73_RS19360 104103 104330 -1 linear amide C-N hydrolase Morganella psychrotolerans
8 group_3855 F4V73_RS12555 104868 105953 1 linear amide C-N hydrolase Morganella psychrotolerans
9 group_3855 PMI_RS06810 1487412 1488464 1 linear amide C-N hydrolase Proteus mirabilis HI4320
10 group_179 PMI_RS10435 2292637 2293722 -1 linear amide C-N hydrolase Proteus mirabilis HI4320