COG2966


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2966, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Uncharacterized membrane protein YjjP, DUF1212 family
Function(s) descr. Function unknown (S)

Occurence in the database

COG2966 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_595 FBDBKF_01770 43356 44144 1 yjjP DUF1212 domain-containing protein Morganella morganii S1
1 group_595 EHELCC_02240 431176 431964 1 yjjP DUF1212 domain-containing protein Morganella morganii S2
2 group_595 NLDBIP_01220 248172 248960 -1 yjjP DUF1212 domain-containing protein Morganella morganii S4
3 group_595 LHKJJB_00815 143725 144513 1 yjjP DUF1212 domain-containing protein Morganella morganii S3
4 group_595 HKOGLL_00855 149236 150024 1 yjjP DUF1212 domain-containing protein Morganella morganii S5
5 group_595 F4V73_RS04100 867357 868145 1 threonine/serine exporter ThrE family protein Morganella psychrotolerans
6 group_595 PMI_RS06985 1526663 1527466 -1 threonine/serine exporter ThrE family protein Proteus mirabilis HI4320