COG2924


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2924, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Fe-S cluster biosynthesis and repair protein YggX
Function(s) descr. Inorganic ion transport and metabolism (P)
Posttranslational modification, protein turnover, chaperones (O)

Occurence in the database

COG2924 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1990 FBDBKF_14990 10467 10739 -1 yggX oxidative damage protection protein Morganella morganii S1
1 group_1990 EHELCC_11255 74167 74439 1 yggX oxidative damage protection protein Morganella morganii S2
2 group_1990 NLDBIP_11600 74167 74439 1 yggX oxidative damage protection protein Morganella morganii S4
3 group_1990 LHKJJB_11460 74167 74439 1 yggX oxidative damage protection protein Morganella morganii S3
4 group_1990 HKOGLL_10070 74167 74439 1 yggX oxidative damage protection protein Morganella morganii S5
5 group_1990 F4V73_RS12460 75002 75274 1 oxidative damage protection protein Morganella psychrotolerans
6 group_1990 PMI_RS01550 377380 377652 -1 oxidative damage protection protein Proteus mirabilis HI4320