COG2912


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2912, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Regulator of sirC expression, contains transglutaminase-like and TPR domains
Function(s) descr. Signal transduction mechanisms (T)

Occurence in the database

COG2912 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_613 FBDBKF_01935 74372 75178 1 sirB1 invasion regulator SirB1 Morganella morganii S1
1 group_613 EHELCC_02405 462192 462998 1 sirB1 invasion regulator SirB1 Morganella morganii S2
2 group_613 NLDBIP_01055 217138 217944 -1 sirB1 invasion regulator SirB1 Morganella morganii S4
3 group_613 LHKJJB_00980 174741 175547 1 sirB1 invasion regulator SirB1 Morganella morganii S3
4 group_613 HKOGLL_01020 180252 181058 1 sirB1 invasion regulator SirB1 Morganella morganii S5
5 group_613 F4V73_RS04280 904613 905419 1 sirB1 invasion regulator SirB1 Morganella psychrotolerans
6 group_613 PMI_RS05275 1152454 1153269 1 sirB1 invasion regulator SirB1 Proteus mirabilis HI4320