COG2871


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2871, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG2871 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2019 FBDBKF_15155 41329 42555 1 nqrF NADH:ubiquinone reductase (Na(+)-transporting) subunit F Morganella morganii S1
1 group_2019 EHELCC_11090 42351 43577 -1 nqrF NADH:ubiquinone reductase (Na(+)-transporting) subunit F Morganella morganii S2
2 group_2019 NLDBIP_11435 42351 43577 -1 nqrF NADH:ubiquinone reductase (Na(+)-transporting) subunit F Morganella morganii S4
3 group_2019 LHKJJB_11295 42351 43577 -1 nqrF NADH:ubiquinone reductase (Na(+)-transporting) subunit F Morganella morganii S3
4 group_2019 HKOGLL_09905 42351 43577 -1 nqrF NADH:ubiquinone reductase (Na(+)-transporting) subunit F Morganella morganii S5
5 group_2019 F4V73_RS12290 42058 43284 -1 nqrF NADH:ubiquinone reductase (Na(+)-transporting) subunit F Morganella psychrotolerans
6 group_2019 PMI_RS01710 406425 407651 1 nqrF NADH:ubiquinone reductase (Na(+)-transporting) subunit F Proteus mirabilis HI4320