COG2854


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2854, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter Mla
Function(s) descr. Cell wall/membrane/envelope biogenesis (M)

Occurence in the database

COG2854 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_726 FBDBKF_03200 43040 43669 -1 mlaC phospholipid-binding protein MlaC Morganella morganii S1
1 group_726 EHELCC_07335 203434 204063 1 mlaC phospholipid-binding protein MlaC Morganella morganii S2
2 group_726 NLDBIP_07660 203307 203936 1 mlaC phospholipid-binding protein MlaC Morganella morganii S4
3 group_726 LHKJJB_07195 167053 167682 1 mlaC phospholipid-binding protein MlaC Morganella morganii S3
4 group_726 HKOGLL_03735 65705 66334 -1 mlaC phospholipid-binding protein MlaC Morganella morganii S5
5 group_726 F4V73_RS11720 493461 494090 1 mlaC phospholipid-binding protein MlaC Morganella psychrotolerans
6 group_726 PMI_RS18200 3993673 3994302 1 mlaC phospholipid-binding protein MlaC Proteus mirabilis HI4320