COG2827


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2827, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Predicted endonuclease, GIY-YIG superfamily
Function(s) descr. Replication, recombination and repair (L)

Occurence in the database

COG2827 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1419 FBDBKF_08765 134254 134574 -1 yhbQ putative endonuclease, GIY-YIG superfamily Morganella morganii S1
1 group_1419 EHELCC_12760 29151 29471 1 yhbQ putative endonuclease, GIY-YIG superfamily Morganella morganii S2
2 group_1419 NLDBIP_13100 29151 29471 1 yhbQ putative endonuclease, GIY-YIG superfamily Morganella morganii S4
3 group_1419 LHKJJB_13455 132972 133292 -1 yhbQ putative endonuclease, GIY-YIG superfamily Morganella morganii S3
4 group_1419 HKOGLL_11575 29151 29471 1 yhbQ putative endonuclease, GIY-YIG superfamily Morganella morganii S5
5 group_1419 F4V73_RS09980 102316 102636 -1 GIY-YIG nuclease family protein Morganella psychrotolerans
6 group_1419 PMI_RS17170 3775674 3775955 -1 GIY-YIG nuclease family protein Proteus mirabilis HI4320