COG2819


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2819, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Predicted hydrolase of the alpha/beta superfamily
Function(s) descr. General function prediction only (R)

Occurence in the database

COG2819 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1659 FBDBKF_11090 43173 44033 1 ybbA putative hydrolase of the alpha/beta superfamily Morganella morganii S1
1 group_1659 EHELCC_05135 15435 16295 -1 ybbA putative hydrolase of the alpha/beta superfamily Morganella morganii S2
2 group_1659 NLDBIP_05455 56508 57368 -1 ybbA putative hydrolase of the alpha/beta superfamily Morganella morganii S4
3 group_1659 LHKJJB_02335 34032 34892 -1 ybbA putative hydrolase of the alpha/beta superfamily Morganella morganii S3
4 group_1659 HKOGLL_15715 57472 58332 -1 ybbA putative hydrolase of the alpha/beta superfamily Morganella morganii S5
5 group_1659 F4V73_RS08180 1700612 1701460 -1 alpha/beta hydrolase-fold protein Morganella psychrotolerans
6 group_1659 PMI_RS09580 2090637 2091464 -1 alpha/beta hydrolase-fold protein Proteus mirabilis HI4320