COG2818


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2818, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description 3-methyladenine DNA glycosylase Tag
Function(s) descr. Replication, recombination and repair (L)

Occurence in the database

COG2818 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1721 FBDBKF_12020 55194 55766 1 tag 3-methyladenine DNA glycosylase Tag Morganella morganii S1
1 group_1721 EHELCC_14285 78939 79511 -1 tag 3-methyladenine DNA glycosylase Tag Morganella morganii S2
2 group_1721 NLDBIP_15380 82876 83448 -1 tag 3-methyladenine DNA glycosylase Tag Morganella morganii S4
3 group_1721 LHKJJB_15230 55194 55766 1 tag 3-methyladenine DNA glycosylase Tag Morganella morganii S3
4 group_1721 HKOGLL_14350 41857 42429 1 tag 3-methyladenine DNA glycosylase Tag Morganella morganii S5
5 group_1721 F4V73_RS14635 160512 161063 -1 DNA-3-methyladenine glycosylase I Morganella psychrotolerans
6 group_1721 PMI_RS14100 3131364 3131945 -1 DNA-3-methyladenine glycosylase I Proteus mirabilis HI4320