COG2502


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2502, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Asparagine synthetase A
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG2502 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2060 FBDBKF_15435 13123 14115 -1 asnA aspartate--ammonia ligase Morganella morganii S1
1 group_2060 EHELCC_15795 12423 13415 -1 asnA aspartate--ammonia ligase Morganella morganii S2
2 group_2060 NLDBIP_16575 67248 68240 1 asnA aspartate--ammonia ligase Morganella morganii S4
3 group_2060 LHKJJB_16230 12423 13415 -1 asnA aspartate--ammonia ligase Morganella morganii S3
4 group_2060 HKOGLL_16000 12423 13415 -1 asnA aspartate--ammonia ligase Morganella morganii S5
5 group_2060 F4V73_RS17710 183025 184017 1 asnA aspartate--ammonia ligase Morganella psychrotolerans
6 group_2060 PMI_RS15115 3355746 3356738 -1 asnA aspartate--ammonia ligase Proteus mirabilis HI4320