COG2253


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2253, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Predicted nucleotidyltransferase component of viral defense system
Function(s) descr. Defense mechanisms (V)

Occurence in the database

COG2253 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2201 FBDBKF_16790 36129 37052 1 Nucleotidyl transferase AbiEii/AbiGii toxin family protein Morganella morganii S1
1 group_2201 EHELCC_10670 176719 177642 -1 Nucleotidyl transferase AbiEii/AbiGii toxin family protein Morganella morganii S2
2 group_2201 NLDBIP_11015 154990 155913 -1 Nucleotidyl transferase AbiEii/AbiGii toxin family protein Morganella morganii S4
3 group_2201 LHKJJB_10340 35615 36538 1 Nucleotidyl transferase AbiEii/AbiGii toxin family protein Morganella morganii S3
4 group_2201 HKOGLL_16505 35624 36547 1 Nucleotidyl transferase AbiEii/AbiGii toxin family protein Morganella morganii S5
5 group_2201 PMI_RS11455 2523778 2524707 -1 nucleotidyl transferase AbiEii/AbiGii toxin family protein Proteus mirabilis HI4320
6 group_4577 PMI_RS12175 2692466 2693404 -1 nucleotidyl transferase AbiEii/AbiGii toxin family protein Proteus mirabilis HI4320
7 group_2201 PMI_RS12320 2731700 2732620 1 nucleotidyl transferase AbiEii/AbiGii toxin family protein Proteus mirabilis HI4320