COG2180


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2180, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Nitrate reductase assembly protein NarJ, required for insertion of molybdenum cofactor
Function(s) descr. Energy production and conversion (C)
Inorganic ion transport and metabolism (P)
Posttranslational modification, protein turnover, chaperones (O)

Occurence in the database

COG2180 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2430 FBDBKF_19645 12938 13672 -1 narJ nitrate reductase molybdenum cofactor assembly chaperone Morganella morganii S1
1 group_2430 EHELCC_16935 48165 48899 -1 narJ nitrate reductase molybdenum cofactor assembly chaperone Morganella morganii S2
2 group_2430 NLDBIP_17515 6867 7601 1 narJ nitrate reductase molybdenum cofactor assembly chaperone Morganella morganii S4
3 group_2430 LHKJJB_17435 6867 7601 1 narJ nitrate reductase molybdenum cofactor assembly chaperone Morganella morganii S3
4 group_2430 HKOGLL_17250 6867 7601 1 narJ nitrate reductase molybdenum cofactor assembly chaperone Morganella morganii S5
5 group_2430 F4V73_RS10440 201006 201740 -1 narJ nitrate reductase molybdenum cofactor assembly chaperone Morganella psychrotolerans
6 group_2430 PMI_RS17775 3904575 3905300 1 narJ nitrate reductase molybdenum cofactor assembly chaperone Proteus mirabilis HI4320