COG2080


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2080, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Aldehyde, CO, or xanthine dehydrogenase, Fe-S subunit, CoxS/CutS family
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG2080 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2769 FBDBKF_07790 79072 79551 -1 xdhC xanthine dehydrogenase iron sulfur-binding subunit XdhC Morganella morganii S1
1 group_2769 EHELCC_13620 53266 53745 -1 xdhC xanthine dehydrogenase iron sulfur-binding subunit XdhC Morganella morganii S2
2 group_2769 NLDBIP_14065 74141 74620 -1 xdhC xanthine dehydrogenase iron sulfur-binding subunit XdhC Morganella morganii S4
3 group_2769 LHKJJB_08785 85129 85608 1 xdhC xanthine dehydrogenase iron sulfur-binding subunit XdhC Morganella morganii S3
4 group_2769 HKOGLL_08335 85129 85608 1 xdhC xanthine dehydrogenase iron sulfur-binding subunit XdhC Morganella morganii S5
5 group_2769 F4V73_RS13255 278255 278734 1 xdhC xanthine dehydrogenase iron sulfur-binding subunit XdhC Morganella psychrotolerans