COG2017


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2017, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Galactose mutarotase or related enzyme
Function(s) descr. Carbohydrate transport and metabolism (G)

Occurence in the database

COG2017 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2866 FBDBKF_11070 37787 38857 1 galM Galactose mutarotase or related enzyme Morganella morganii S1
1 group_2866 EHELCC_05155 20611 21681 -1 galM Galactose mutarotase or related enzyme Morganella morganii S2
2 group_2866 NLDBIP_05475 61676 62746 -1 galM Galactose mutarotase or related enzyme Morganella morganii S4
3 group_2866 LHKJJB_02355 39200 40270 -1 galM Galactose mutarotase or related enzyme Morganella morganii S3
4 group_2866 HKOGLL_15735 62640 63710 -1 galM Galactose mutarotase or related enzyme Morganella morganii S5
5 group_2866 PMI_RS09600 2097053 2098123 -1 galM galactose-1-epimerase Proteus mirabilis HI4320