COG1944
Help to interpret the results
Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected COG entry COG1944
Protein list: lists the 7 occurences of the COG entry within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the COG entry of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entry has been clustered.
Orthogroups are shown in red if they are annotated with that particular COG entry in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and COG entry prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entry.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entry prediction.
Description
Description |
Ribosomal protein S12 methylthiotransferase accessory factor YcaO |
Function(s) descr. |
Translation, ribosomal structure and biogenesis (J) |
Occurence in the database
COG1944 is associated with 7 different
proteins
|
The 7 proteins are classified into 1 different orthogroup(s)
|
|
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_1284 |
FBDBKF_07140 |
98607 |
100421 |
-1 |
ycaO |
30S ribosomal protein S12 methylthiotransferase accessory factor YcaO |
Morganella morganii S1 |
1 |
group_1284 |
EHELCC_03830 |
85765 |
87579 |
1 |
ycaO |
30S ribosomal protein S12 methylthiotransferase accessory factor YcaO |
Morganella morganii S2 |
2 |
group_1284 |
NLDBIP_03830 |
85561 |
87375 |
1 |
ycaO |
30S ribosomal protein S12 methylthiotransferase accessory factor YcaO |
Morganella morganii S4 |
3 |
group_1284 |
LHKJJB_09660 |
85675 |
87489 |
1 |
ycaO |
30S ribosomal protein S12 methylthiotransferase accessory factor YcaO |
Morganella morganii S3 |
4 |
group_1284 |
HKOGLL_09315 |
103563 |
105377 |
-1 |
ycaO |
30S ribosomal protein S12 methylthiotransferase accessory factor YcaO |
Morganella morganii S5 |
5 |
group_1284 |
F4V73_RS01325 |
286341 |
288128 |
-1 |
ycaO |
30S ribosomal protein S12 methylthiotransferase accessory factor YcaO |
Morganella psychrotolerans |
6 |
group_1284 |
PMI_RS03480 |
773930 |
775687 |
-1 |
|
30S ribosomal protein S12 methylthiotransferase accessory protein YcaO |
Proteus mirabilis HI4320 |