COG1942


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1942, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family
Function(s) descr. Secondary metabolites biosynthesis, transport and catabolism (Q)

Occurence in the database

COG1942 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1714 FBDBKF_11950 38432 38638 1 pptA Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family Morganella morganii S1
1 group_1714 EHELCC_14355 96067 96273 -1 pptA Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family Morganella morganii S2
2 group_1714 NLDBIP_15450 100004 100210 -1 pptA Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family Morganella morganii S4
3 group_1714 LHKJJB_15160 38432 38638 1 pptA Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family Morganella morganii S3
4 group_1714 HKOGLL_14280 25095 25301 1 pptA Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family Morganella morganii S5
5 group_1714 F4V73_RS14705 177947 178153 -1 4-oxalocrotonate tautomerase family protein Morganella psychrotolerans
6 group_1714 PMI_RS14025 3113684 3113890 1 4-oxalocrotonate tautomerase family protein Proteus mirabilis HI4320