COG1929


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1929, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Glycerate kinase
Function(s) descr. Carbohydrate transport and metabolism (G)

Occurence in the database

COG1929 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_763 FBDBKF_03490 103562 104698 -1 glxK Glycerate kinase Morganella morganii S1
1 group_763 EHELCC_07045 142405 143541 1 glxK Glycerate kinase Morganella morganii S2
2 group_763 NLDBIP_07370 142278 143414 1 glxK Glycerate kinase Morganella morganii S4
3 group_763 LHKJJB_06905 106024 107160 1 glxK Glycerate kinase Morganella morganii S3
4 group_763 HKOGLL_04025 126227 127363 -1 glxK Glycerate kinase Morganella morganii S5
5 group_763 F4V73_RS11405 423342 424505 1 glycerate kinase Morganella psychrotolerans
6 group_763 PMI_RS17960 3947064 3948212 1 glycerate kinase Proteus mirabilis HI4320