COG1914


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1914, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Mn2+ or Fe2+ transporter, NRAMP family
Function(s) descr. Inorganic ion transport and metabolism (P)

Occurence in the database

COG1914 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3273 FBDBKF_07710 60021 61379 -1 mntH Nramp family divalent metal transporter Morganella morganii S1
1 group_3273 EHELCC_13540 34215 35573 -1 mntH Nramp family divalent metal transporter Morganella morganii S2
2 group_3273 NLDBIP_13985 55090 56448 -1 mntH Nramp family divalent metal transporter Morganella morganii S4
3 group_3273 LHKJJB_08865 103301 104659 1 mntH Nramp family divalent metal transporter Morganella morganii S3
4 group_3273 HKOGLL_08415 103301 104659 1 mntH Nramp family divalent metal transporter Morganella morganii S5
5 group_4726 PMI_RS17690 3883475 3884725 1 divalent metal cation transporter Proteus mirabilis HI4320