COG1807


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1807, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 21 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description PMT family glycosyltransferase ArnT/Agl22, involved in glycosylation of proteins and lipid IVA
Function(s) descr. Cell wall/membrane/envelope biogenesis (M)

Occurence in the database

COG1807 is associated with 21 different proteins (see tab "Protein list" and "Profile")
The 21 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1739 FBDBKF_12130 81250 82722 1 arnT PMT family glycosyltransferase ArnT/Agl22, involved in glycosylation of proteins and lipid IVA Morganella morganii S1
1 group_53 FBDBKF_13345 45835 47532 -1 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase Morganella morganii S1
2 group_53 FBDBKF_13360 48476 50137 -1 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase Morganella morganii S1
3 group_53 EHELCC_08735 225054 226715 1 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase Morganella morganii S2
4 group_53 EHELCC_08750 227659 229356 1 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase Morganella morganii S2
5 group_1739 EHELCC_14175 51983 53455 -1 arnT PMT family glycosyltransferase ArnT/Agl22, involved in glycosylation of proteins and lipid IVA Morganella morganii S2
6 group_53 NLDBIP_09060 225054 226715 1 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase Morganella morganii S4
7 group_53 NLDBIP_09075 227659 229356 1 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase Morganella morganii S4
8 group_1739 NLDBIP_15270 55920 57392 -1 arnT PMT family glycosyltransferase ArnT/Agl22, involved in glycosylation of proteins and lipid IVA Morganella morganii S4
9 group_53 LHKJJB_05190 27803 29500 -1 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase Morganella morganii S3
10 group_53 LHKJJB_05205 30444 32105 -1 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase Morganella morganii S3
11 group_1739 LHKJJB_15340 81250 82722 1 arnT PMT family glycosyltransferase ArnT/Agl22, involved in glycosylation of proteins and lipid IVA Morganella morganii S3
12 group_53 HKOGLL_05710 209645 211306 1 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase Morganella morganii S5
13 group_53 HKOGLL_05725 212250 213947 1 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase Morganella morganii S5
14 group_1739 HKOGLL_14460 67913 69385 1 arnT PMT family glycosyltransferase ArnT/Agl22, involved in glycosylation of proteins and lipid IVA Morganella morganii S5
15 group_53 F4V73_RS03400 725674 727335 1 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase Morganella psychrotolerans
16 group_53 F4V73_RS03415 728458 730155 1 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase Morganella psychrotolerans
17 group_1739 F4V73_RS14510 131251 132723 -1 glycosyltransferase family 39 protein Morganella psychrotolerans
18 group_53 PMI_RS01335 322226 323872 1 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase Proteus mirabilis HI4320
19 group_53 PMI_RS05090 1112662 1114323 1 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase Proteus mirabilis HI4320
20 group_1739 PMI_RS14420 3199289 3200764 -1 glycosyltransferase family 39 protein Proteus mirabilis HI4320