COG1803


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1803, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Methylglyoxal synthase
Function(s) descr. Carbohydrate transport and metabolism (G)

Occurence in the database

COG1803 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1263 FBDBKF_07365 159441 159899 -1 mgsA methylglyoxal synthase Morganella morganii S1
1 group_1263 EHELCC_03605 26287 26745 1 mgsA methylglyoxal synthase Morganella morganii S2
2 group_1263 NLDBIP_03605 26083 26541 1 mgsA methylglyoxal synthase Morganella morganii S4
3 group_1263 LHKJJB_09435 26197 26655 1 mgsA methylglyoxal synthase Morganella morganii S3
4 group_1263 HKOGLL_09540 164397 164855 -1 mgsA methylglyoxal synthase Morganella morganii S5
5 group_1263 F4V73_RS01550 347876 348334 -1 methylglyoxal synthase Morganella psychrotolerans
6 group_1263 PMI_RS03880 880644 881102 -1 methylglyoxal synthase Proteus mirabilis HI4320