COG1775


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1775, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB
Function(s) descr. Amino acid transport and metabolism (E)
Secondary metabolites biosynthesis, transport and catabolism (Q)

Occurence in the database

COG1775 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3056 FBDBKF_18265 16573 17730 1 hgdB double-cubane-cluster-containing anaerobic reductase Morganella morganii S1
1 group_3056 EHELCC_18300 16446 17603 1 hgdB double-cubane-cluster-containing anaerobic reductase Morganella morganii S2
2 group_3056 NLDBIP_18225 16647 17804 1 hgdB double-cubane-cluster-containing anaerobic reductase Morganella morganii S4
3 group_3056 LHKJJB_18420 16485 17642 1 hgdB double-cubane-cluster-containing anaerobic reductase Morganella morganii S3
4 group_3056 HKOGLL_18155 16463 17620 1 hgdB double-cubane-cluster-containing anaerobic reductase Morganella morganii S5
5 group_3056 F4V73_RS01790 394116 395273 1 double-cubane-cluster-containing anaerobic reductase Morganella psychrotolerans