COG1770


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1770, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Protease II
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG1770 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2234 FBDBKF_17115 7881 9914 -1 ptrB Protease II Morganella morganii S1
1 group_2234 EHELCC_01775 345587 347620 1 ptrB Protease II Morganella morganii S2
2 group_2234 NLDBIP_01685 332516 334549 -1 ptrB Protease II Morganella morganii S4
3 group_2234 LHKJJB_00350 58136 60169 1 ptrB Protease II Morganella morganii S3
4 group_2234 HKOGLL_00390 63647 65680 1 ptrB Protease II Morganella morganii S5
5 group_2234 F4V73_RS05875 1252312 1254354 -1 S9 family peptidase Morganella psychrotolerans
6 group_2234 PMI_RS07540 1645265 1647433 -1 S9 family peptidase Proteus mirabilis HI4320