COG1740


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1740, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Ni,Fe-hydrogenase I small subunit
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG1740 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2403 FBDBKF_19265 522 1655 1 hybO hydrogenase 2 small subunit Morganella morganii S1
1 group_2403 EHELCC_07550 247613 248746 1 hybO hydrogenase 2 small subunit Morganella morganii S2
2 group_2403 NLDBIP_07875 247486 248619 1 hybO hydrogenase 2 small subunit Morganella morganii S4
3 group_2403 LHKJJB_07410 211232 212365 1 hybO hydrogenase 2 small subunit Morganella morganii S3
4 group_2403 HKOGLL_03520 21022 22155 -1 hybO hydrogenase 2 small subunit Morganella morganii S5
5 group_2403 F4V73_RS12025 559244 560365 1 hybO hydrogenase 2 small subunit Morganella psychrotolerans
6 group_2403 PMI_RS00150 53376 54500 1 hybO hydrogenase 2 small subunit Proteus mirabilis HI4320