COG1637


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1637, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 5 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Endonuclease NucS, RecB family
Function(s) descr. Replication, recombination and repair (L)

Occurence in the database

COG1637 is associated with 5 different proteins (see tab "Protein list" and "Profile")
The 5 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3306 FBDBKF_10285 11376 12476 1 nucS Endonuclease NucS, RecB family Morganella morganii S1
1 group_3306 EHELCC_14620 11366 12466 1 nucS Endonuclease NucS, RecB family Morganella morganii S2
2 group_3306 NLDBIP_14450 11366 12466 1 nucS Endonuclease NucS, RecB family Morganella morganii S4
3 group_3306 LHKJJB_14895 129260 130360 -1 nucS Endonuclease NucS, RecB family Morganella morganii S3
4 group_3306 HKOGLL_13515 129260 130360 -1 nucS Endonuclease NucS, RecB family Morganella morganii S5