COG1584


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1584, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Succinate-acetate transporter SatP
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG1584 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2928 FBDBKF_14050 2182 2751 1 satP acetate uptake transporter Morganella morganii S1
1 group_2928 EHELCC_08230 114234 114803 -1 satP acetate uptake transporter Morganella morganii S2
2 group_2928 NLDBIP_08555 114234 114803 -1 satP acetate uptake transporter Morganella morganii S4
3 group_2928 LHKJJB_05710 142356 142925 1 satP acetate uptake transporter Morganella morganii S3
4 group_2928 HKOGLL_05205 98825 99394 -1 satP acetate uptake transporter Morganella morganii S5
5 group_2928 F4V73_RS02890 613829 614398 -1 satP acetate uptake transporter Morganella psychrotolerans