COG1580


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1580, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Flagellar basal body-associated protein FliL
Function(s) descr. Cell motility (N)

Occurence in the database

COG1580 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_456 FBDBKF_00620 103918 104403 1 fliL flagellar basal body-associated protein FliL Morganella morganii S1
1 group_456 EHELCC_00925 204465 204950 -1 fliL flagellar basal body-associated protein FliL Morganella morganii S2
2 group_456 NLDBIP_02535 475186 475671 1 fliL flagellar basal body-associated protein FliL Morganella morganii S4
3 group_456 LHKJJB_04050 82427 82912 1 fliL flagellar basal body-associated protein FliL Morganella morganii S3
4 group_456 HKOGLL_02995 204670 205155 -1 fliL flagellar basal body-associated protein FliL Morganella morganii S5
5 group_456 F4V73_RS06630 1380833 1381318 1 fliL flagellar basal body-associated protein FliL Morganella psychrotolerans
6 group_456 PMI_RS07990 1750123 1750605 1 fliL flagellar basal body-associated protein FliL Proteus mirabilis HI4320