COG1454


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1454, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 15 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Alcohol dehydrogenase, class IV
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG1454 is associated with 15 different proteins (see tab "Protein list" and "Profile")
The 15 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_968 FBDBKF_05335 74127 76787 1 adhE bifunctional acetaldehyde-CoA/alcohol dehydrogenase Morganella morganii S1
1 group_186 FBDBKF_07580 26911 28113 1 eutG Alcohol dehydrogenase, class IV Morganella morganii S1
2 group_968 EHELCC_12255 104707 107367 -1 adhE bifunctional acetaldehyde-CoA/alcohol dehydrogenase Morganella morganii S2
3 group_186 EHELCC_13410 1105 2307 1 eutG Alcohol dehydrogenase, class IV Morganella morganii S2
4 group_968 NLDBIP_12595 104662 107322 -1 adhE bifunctional acetaldehyde-CoA/alcohol dehydrogenase Morganella morganii S4
5 group_186 NLDBIP_13855 21980 23182 1 eutG Alcohol dehydrogenase, class IV Morganella morganii S4
6 group_186 LHKJJB_08995 136567 137769 -1 eutG Alcohol dehydrogenase, class IV Morganella morganii S3
7 group_968 LHKJJB_12455 104707 107367 -1 adhE bifunctional acetaldehyde-CoA/alcohol dehydrogenase Morganella morganii S3
8 group_186 HKOGLL_08545 136567 137769 -1 eutG Alcohol dehydrogenase, class IV Morganella morganii S5
9 group_968 HKOGLL_11070 104707 107367 -1 adhE bifunctional acetaldehyde-CoA/alcohol dehydrogenase Morganella morganii S5
10 group_186 F4V73_RS04865 1034168 1035331 -1 dhaT 1,3-propanediol dehydrogenase Morganella psychrotolerans
11 group_186 F4V73_RS13540 342727 343929 -1 iron-containing alcohol dehydrogenase Morganella psychrotolerans
12 group_186 PMI_RS03235 715743 716894 1 yiaY L-threonine dehydrogenase Proteus mirabilis HI4320
13 group_968 PMI_RS07195 1573743 1576406 1 adhE bifunctional acetaldehyde-CoA/alcohol dehydrogenase Proteus mirabilis HI4320
14 group_186 PMI_RS13390 2968776 2969924 -1 1-propanol dehydrogenase PduQ Proteus mirabilis HI4320