COG1444


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1444, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description tRNA(Met) C34 N-acetyltransferase TmcA
Function(s) descr. Translation, ribosomal structure and biogenesis (J)

Occurence in the database

COG1444 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1830 FBDBKF_13555 88207 90213 -1 tmcA tRNA(Met) C34 N-acetyltransferase TmcA Morganella morganii S1
1 group_1830 EHELCC_08540 184978 186984 1 tmcA tRNA(Met) C34 N-acetyltransferase TmcA Morganella morganii S2
2 group_1830 NLDBIP_08865 184978 186984 1 tmcA tRNA(Met) C34 N-acetyltransferase TmcA Morganella morganii S4
3 group_1830 LHKJJB_05400 70175 72181 -1 tmcA tRNA(Met) C34 N-acetyltransferase TmcA Morganella morganii S3
4 group_1830 HKOGLL_05515 169569 171575 1 tmcA tRNA(Met) C34 N-acetyltransferase TmcA Morganella morganii S5
5 group_1830 F4V73_RS03210 684125 686140 1 GNAT family N-acetyltransferase Morganella psychrotolerans
6 group_1830 PMI_RS07595 1656427 1658478 -1 GNAT family N-acetyltransferase Proteus mirabilis HI4320