COG1256


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1256, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Flagellar hook-associated protein FlgK
Function(s) descr. Cell motility (N)

Occurence in the database

COG1256 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_464 FBDBKF_00670 111140 112780 -1 flgK flagellar hook-associated protein FlgK Morganella morganii S1
1 group_464 EHELCC_00875 196088 197728 1 flgK flagellar hook-associated protein FlgK Morganella morganii S2
2 group_464 NLDBIP_02585 482408 484048 -1 flgK flagellar hook-associated protein FlgK Morganella morganii S4
3 group_464 LHKJJB_04100 89649 91289 -1 flgK flagellar hook-associated protein FlgK Morganella morganii S3
4 group_464 HKOGLL_02945 196293 197933 1 flgK flagellar hook-associated protein FlgK Morganella morganii S5
5 group_464 F4V73_RS06680 1387989 1389629 -1 flgK flagellar hook-associated protein FlgK Morganella psychrotolerans
6 group_464 PMI_RS08030 1755620 1757263 -1 flgK flagellar hook-associated protein FlgK Proteus mirabilis HI4320