COG1196


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1196, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Chromosome segregation ATPase Smc
Function(s) descr. Cell cycle control, cell division, chromosome partitioning (D)

Occurence in the database

COG1196 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1285 FBDBKF_07810 84142 88107 1 peptidylprolyl isomerase Morganella morganii S1
1 group_2871 FBDBKF_11210 60336 61277 -1 tolA Cell envelope biogenesis protein TolA Morganella morganii S1
2 group_1285 EHELCC_13640 58336 62301 1 peptidylprolyl isomerase Morganella morganii S2
3 group_2871 EHELCC_18005 39438 40379 1 tolA Cell envelope biogenesis protein TolA Morganella morganii S2
4 group_2871 NLDBIP_05335 39264 40205 1 tolA Cell envelope biogenesis protein TolA Morganella morganii S4
5 group_1285 NLDBIP_14085 79211 83176 1 peptidylprolyl isomerase Morganella morganii S4
6 group_2871 LHKJJB_02215 16788 17729 1 tolA Cell envelope biogenesis protein TolA Morganella morganii S3
7 group_1285 LHKJJB_08765 76573 80538 -1 peptidylprolyl isomerase Morganella morganii S3
8 group_1285 HKOGLL_08315 76573 80538 -1 peptidylprolyl isomerase Morganella morganii S5
9 group_2871 HKOGLL_15595 40228 41169 1 tolA Cell envelope biogenesis protein TolA Morganella morganii S5
10 group_2871 F4V73_RS06285 1311884 1312858 1 hypothetical protein Morganella psychrotolerans
11 group_4096 F4V73_RS08980 1867678 1877271 -1 hypothetical protein Morganella psychrotolerans
12 group_1285 F4V73_RS13235 269758 273600 -1 hypothetical protein Morganella psychrotolerans
13 group_1285 PMI_RS09680 2111380 2113848 -1 sugar transporter Proteus mirabilis HI4320