COG1178
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1178, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries
within the database. 20 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.
Description
Description |
ABC-type Fe3+ transport system, permease component |
Function(s) descr. |
Inorganic ion transport and metabolism (P) |
Occurence in the database
COG1178 is associated with 20 different proteins (see tab "Protein list" and "Profile") |
The 20 proteins are classified into 3 different orthogroup(s)
|
# |
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_1093 |
FBDBKF_06215 |
71976 |
73586 |
1 |
thiP |
thiamine/thiamine pyrophosphate ABC transporter permease ThiP |
Morganella morganii S1 |
1 |
group_300 |
FBDBKF_07920 |
113582 |
115660 |
-1 |
|
Iron ABC transporter permease |
Morganella morganii S1 |
2 |
group_3411 |
FBDBKF_13660 |
2621 |
4210 |
-1 |
fbpB |
ABC-type Fe3+ transport system, permease component |
Morganella morganii S1 |
3 |
group_1093 |
EHELCC_09260 |
72548 |
74158 |
1 |
thiP |
thiamine/thiamine pyrophosphate ABC transporter permease ThiP |
Morganella morganii S2 |
4 |
group_3411 |
EHELCC_11330 |
87497 |
89086 |
-1 |
fbpB |
ABC-type Fe3+ transport system, permease component |
Morganella morganii S2 |
5 |
group_300 |
EHELCC_13750 |
87776 |
89854 |
-1 |
|
Iron ABC transporter permease |
Morganella morganii S2 |
6 |
group_1093 |
NLDBIP_09640 |
72548 |
74158 |
1 |
thiP |
thiamine/thiamine pyrophosphate ABC transporter permease ThiP |
Morganella morganii S4 |
7 |
group_3411 |
NLDBIP_11675 |
87497 |
89086 |
-1 |
fbpB |
ABC-type Fe3+ transport system, permease component |
Morganella morganii S4 |
8 |
group_300 |
NLDBIP_14195 |
108651 |
110729 |
-1 |
|
Iron ABC transporter permease |
Morganella morganii S4 |
9 |
group_1093 |
LHKJJB_08115 |
143080 |
144690 |
-1 |
thiP |
thiamine/thiamine pyrophosphate ABC transporter permease ThiP |
Morganella morganii S3 |
10 |
group_300 |
LHKJJB_08655 |
49020 |
51098 |
1 |
|
Iron ABC transporter permease |
Morganella morganii S3 |
11 |
group_3411 |
LHKJJB_11535 |
87497 |
89086 |
-1 |
fbpB |
ABC-type Fe3+ transport system, permease component |
Morganella morganii S3 |
12 |
group_1093 |
HKOGLL_07665 |
143080 |
144690 |
-1 |
thiP |
thiamine/thiamine pyrophosphate ABC transporter permease ThiP |
Morganella morganii S5 |
13 |
group_300 |
HKOGLL_08205 |
49020 |
51098 |
1 |
|
Iron ABC transporter permease |
Morganella morganii S5 |
14 |
group_3411 |
HKOGLL_10145 |
87497 |
89086 |
-1 |
fbpB |
ABC-type Fe3+ transport system, permease component |
Morganella morganii S5 |
15 |
group_300 |
F4V73_RS13065 |
227843 |
229921 |
1 |
|
iron ABC transporter permease |
Morganella psychrotolerans |
16 |
group_1093 |
F4V73_RS15700 |
140634 |
142244 |
-1 |
thiP |
thiamine/thiamine pyrophosphate ABC transporter permease ThiP |
Morganella psychrotolerans |
17 |
group_300 |
PMI_RS00910 |
224095 |
226173 |
-1 |
|
iron ABC transporter permease |
Proteus mirabilis HI4320 |
18 |
group_1093 |
PMI_RS11490 |
2531332 |
2532912 |
1 |
thiP |
thiamine/thiamine pyrophosphate ABC transporter permease ThiP |
Proteus mirabilis HI4320 |
19 |
group_300 |
PMI_RS15200 |
3373382 |
3375073 |
1 |
|
putative 2-aminoethylphosphonate ABC transporter permease subunit |
Proteus mirabilis HI4320 |