COG1178


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1178, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 20 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description ABC-type Fe3+ transport system, permease component
Function(s) descr. Inorganic ion transport and metabolism (P)

Occurence in the database

COG1178 is associated with 20 different proteins (see tab "Protein list" and "Profile")
The 20 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1093 FBDBKF_06215 71976 73586 1 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP Morganella morganii S1
1 group_300 FBDBKF_07920 113582 115660 -1 Iron ABC transporter permease Morganella morganii S1
2 group_3411 FBDBKF_13660 2621 4210 -1 fbpB ABC-type Fe3+ transport system, permease component Morganella morganii S1
3 group_1093 EHELCC_09260 72548 74158 1 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP Morganella morganii S2
4 group_3411 EHELCC_11330 87497 89086 -1 fbpB ABC-type Fe3+ transport system, permease component Morganella morganii S2
5 group_300 EHELCC_13750 87776 89854 -1 Iron ABC transporter permease Morganella morganii S2
6 group_1093 NLDBIP_09640 72548 74158 1 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP Morganella morganii S4
7 group_3411 NLDBIP_11675 87497 89086 -1 fbpB ABC-type Fe3+ transport system, permease component Morganella morganii S4
8 group_300 NLDBIP_14195 108651 110729 -1 Iron ABC transporter permease Morganella morganii S4
9 group_1093 LHKJJB_08115 143080 144690 -1 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP Morganella morganii S3
10 group_300 LHKJJB_08655 49020 51098 1 Iron ABC transporter permease Morganella morganii S3
11 group_3411 LHKJJB_11535 87497 89086 -1 fbpB ABC-type Fe3+ transport system, permease component Morganella morganii S3
12 group_1093 HKOGLL_07665 143080 144690 -1 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP Morganella morganii S5
13 group_300 HKOGLL_08205 49020 51098 1 Iron ABC transporter permease Morganella morganii S5
14 group_3411 HKOGLL_10145 87497 89086 -1 fbpB ABC-type Fe3+ transport system, permease component Morganella morganii S5
15 group_300 F4V73_RS13065 227843 229921 1 iron ABC transporter permease Morganella psychrotolerans
16 group_1093 F4V73_RS15700 140634 142244 -1 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP Morganella psychrotolerans
17 group_300 PMI_RS00910 224095 226173 -1 iron ABC transporter permease Proteus mirabilis HI4320
18 group_1093 PMI_RS11490 2531332 2532912 1 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP Proteus mirabilis HI4320
19 group_300 PMI_RS15200 3373382 3375073 1 putative 2-aminoethylphosphonate ABC transporter permease subunit Proteus mirabilis HI4320