COG1143


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1143, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG1143 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_791 FBDBKF_03710 143876 144427 -1 hyfH hydrogenase 4 subunit H Morganella morganii S1
1 group_1892 FBDBKF_14130 20407 20949 -1 nuoI NADH-quinone oxidoreductase subunit NuoI Morganella morganii S1
2 group_791 EHELCC_06825 102676 103227 1 hyfH hydrogenase 4 subunit H Morganella morganii S2
3 group_1892 EHELCC_08150 96036 96578 1 nuoI NADH-quinone oxidoreductase subunit NuoI Morganella morganii S2
4 group_791 NLDBIP_07150 102549 103100 1 hyfH hydrogenase 4 subunit H Morganella morganii S4
5 group_1892 NLDBIP_08475 96036 96578 1 nuoI NADH-quinone oxidoreductase subunit NuoI Morganella morganii S4
6 group_1892 LHKJJB_05790 160581 161123 -1 nuoI NADH-quinone oxidoreductase subunit NuoI Morganella morganii S3
7 group_791 LHKJJB_06685 66295 66846 1 hyfH hydrogenase 4 subunit H Morganella morganii S3
8 group_791 HKOGLL_04245 166541 167092 -1 hyfH hydrogenase 4 subunit H Morganella morganii S5
9 group_1892 HKOGLL_05125 80627 81169 1 nuoI NADH-quinone oxidoreductase subunit NuoI Morganella morganii S5
10 group_1892 F4V73_RS02805 593415 593957 1 nuoI NADH-quinone oxidoreductase subunit NuoI Morganella psychrotolerans
11 group_791 F4V73_RS11160 373009 373560 1 hyfH hydrogenase 4 subunit H Morganella psychrotolerans
12 group_1892 PMI_RS08610 1879395 1879937 -1 nuoI NADH-quinone oxidoreductase subunit NuoI Proteus mirabilis HI4320
13 group_791 PMI_RS12465 2763231 2763785 -1 hyfH hydrogenase 4 subunit H Proteus mirabilis HI4320