COG1140


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1140, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Nitrate reductase beta subunit
Function(s) descr. Energy production and conversion (C)
Inorganic ion transport and metabolism (P)

Occurence in the database

COG1140 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2431 FBDBKF_19650 13669 15225 -1 narH nitrate reductase subunit beta Morganella morganii S1
1 group_2431 EHELCC_16940 48896 50452 -1 narH nitrate reductase subunit beta Morganella morganii S2
2 group_2431 NLDBIP_17510 5314 6870 1 narH nitrate reductase subunit beta Morganella morganii S4
3 group_2431 LHKJJB_17430 5314 6870 1 narH nitrate reductase subunit beta Morganella morganii S3
4 group_2431 HKOGLL_17245 5314 6870 1 narH nitrate reductase subunit beta Morganella morganii S5
5 group_2431 F4V73_RS10445 201737 203293 -1 narH nitrate reductase subunit beta Morganella psychrotolerans
6 group_2431 PMI_RS17770 3903022 3904575 1 narH nitrate reductase subunit beta Proteus mirabilis HI4320