COG1109


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1109, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Phosphomannomutase
Function(s) descr. Carbohydrate transport and metabolism (G)

Occurence in the database

COG1109 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1400 FBDBKF_08640 109999 111333 1 glmM phosphoglucosamine mutase Morganella morganii S1
1 group_1400 EHELCC_12885 52392 53726 -1 glmM phosphoglucosamine mutase Morganella morganii S2
2 group_1400 NLDBIP_13225 52392 53726 -1 glmM phosphoglucosamine mutase Morganella morganii S4
3 group_1400 LHKJJB_13330 108717 110051 1 glmM phosphoglucosamine mutase Morganella morganii S3
4 group_1400 HKOGLL_11700 52392 53726 -1 glmM phosphoglucosamine mutase Morganella morganii S5
5 group_1400 F4V73_RS09865 77108 78442 1 glmM phosphoglucosamine mutase Morganella psychrotolerans
6 group_1400 PMI_RS16995 3740367 3741704 1 glmM phosphoglucosamine mutase Proteus mirabilis HI4320