COG1069


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1069, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Ribulose kinase
Function(s) descr. Carbohydrate transport and metabolism (G)

Occurence in the database

COG1069 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_603 FBDBKF_01840 54572 56206 -1 araB Ribulose kinase Morganella morganii S1
1 group_603 EHELCC_02310 442392 444026 -1 araB Ribulose kinase Morganella morganii S2
2 group_603 NLDBIP_01150 236110 237744 1 araB Ribulose kinase Morganella morganii S4
3 group_603 LHKJJB_00885 154941 156575 -1 araB Ribulose kinase Morganella morganii S3
4 group_603 HKOGLL_00925 160452 162086 -1 araB Ribulose kinase Morganella morganii S5
5 group_603 F4V73_RS04185 884416 886050 -1 FGGY-family carbohydrate kinase Morganella psychrotolerans
6 group_603 PMI_RS14540 3224012 3225598 -1 FGGY-family carbohydrate kinase Proteus mirabilis HI4320