COG1062


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1062, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Zn-dependent alcohol/formaldehyde dehydrogenase
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG1062 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1279 FBDBKF_07725 63499 64608 1 frmA S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase Morganella morganii S1
1 group_1279 EHELCC_13555 37693 38802 1 frmA S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase Morganella morganii S2
2 group_1279 NLDBIP_14000 58568 59677 1 frmA S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase Morganella morganii S4
3 group_1279 LHKJJB_08850 100072 101181 -1 frmA S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase Morganella morganii S3
4 group_1279 HKOGLL_08400 100072 101181 -1 frmA S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase Morganella morganii S5
5 group_1279 F4V73_RS13355 301531 302640 -1 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase Morganella psychrotolerans
6 group_1279 PMI_RS02220 518312 519424 -1 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase Proteus mirabilis HI4320