COG1057


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1057, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Nicotinate-nucleotide adenylyltransferase NadD
Function(s) descr. Coenzyme transport and metabolism (H)

Occurence in the database

COG1057 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1552 FBDBKF_10050 104050 104706 1 nadD nicotinate-nucleotide adenylyltransferase Morganella morganii S1
1 group_1552 EHELCC_04850 296015 296671 1 nadD nicotinate-nucleotide adenylyltransferase Morganella morganii S2
2 group_1552 NLDBIP_04850 295811 296467 1 nadD nicotinate-nucleotide adenylyltransferase Morganella morganii S4
3 group_1552 LHKJJB_13780 38911 39567 -1 nadD nicotinate-nucleotide adenylyltransferase Morganella morganii S3
4 group_1552 HKOGLL_12755 104831 105487 1 nadD nicotinate-nucleotide adenylyltransferase Morganella morganii S5
5 group_1552 F4V73_RS00285 66983 67639 -1 nadD nicotinate-nucleotide adenylyltransferase Morganella psychrotolerans
6 group_1552 PMI_RS02120 497300 497971 -1 nadD nicotinate-nucleotide adenylyltransferase Proteus mirabilis HI4320