COG1020


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1020, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description EntF, seryl-AMP synthase component of non-ribosomal peptide synthetase
Function(s) descr. Secondary metabolites biosynthesis, transport and catabolism (Q)

Occurence in the database

COG1020 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3015 FBDBKF_17880 1296 7400 1 tam Trans-aconitate methyltransferase Morganella morganii S1
1 group_3015 EHELCC_06455 28976 35080 -1 tam Trans-aconitate methyltransferase Morganella morganii S2
2 group_3015 NLDBIP_06775 28849 34953 -1 tam Trans-aconitate methyltransferase Morganella morganii S4
3 group_3015 LHKJJB_18885 1304 7408 1 tam Trans-aconitate methyltransferase Morganella morganii S3
4 group_3015 HKOGLL_04615 234688 240792 1 tam Trans-aconitate methyltransferase Morganella morganii S5
5 group_3015 PMI_RS12835 2834947 2841051 1 non-ribosomal peptide synthetase Proteus mirabilis HI4320