COG1005


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1005, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description NADH:ubiquinone oxidoreductase subunit 1 (chain H)
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG1005 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1893 FBDBKF_14135 20964 21941 -1 nuoH NADH-quinone oxidoreductase subunit NuoH Morganella morganii S1
1 group_1893 EHELCC_08145 95044 96021 1 nuoH NADH-quinone oxidoreductase subunit NuoH Morganella morganii S2
2 group_1893 NLDBIP_08470 95044 96021 1 nuoH NADH-quinone oxidoreductase subunit NuoH Morganella morganii S4
3 group_1893 LHKJJB_05795 161138 162115 -1 nuoH NADH-quinone oxidoreductase subunit NuoH Morganella morganii S3
4 group_1893 HKOGLL_05120 79635 80612 1 nuoH NADH-quinone oxidoreductase subunit NuoH Morganella morganii S5
5 group_1893 F4V73_RS02800 592424 593401 1 nuoH NADH-quinone oxidoreductase subunit NuoH Morganella psychrotolerans
6 group_1893 PMI_RS08615 1879952 1880929 -1 nuoH NADH-quinone oxidoreductase subunit NuoH Proteus mirabilis HI4320